An improved genome assembly for Larimichthys crocea reveals hepcidin gene expansion with diversified regulation and function
نویسندگان
چکیده
منابع مشابه
An improved Plasmodium cynomolgi genome assembly reveals an unexpected methyltransferase gene expansion
BACKGROUND Plasmodium cynomolgi, a non-human primate malaria parasite species, has been an important model parasite since its discovery in 1907. Similarities in the biology of P. cynomolgi to the closely related, but less tractable, human malaria parasite P. vivax make it the model parasite of choice for liver biology and vaccine studies pertinent to P. vivax malaria. Molecular and genome-scale...
متن کاملResistance gene identification from Larimichthys crocea with machine learning techniques
The research on resistance genes (R-gene) plays a vital role in bioinformatics as it has the capability of coping with adverse changes in the external environment, which can form the corresponding resistance protein by transcription and translation. It is meaningful to identify and predict R-gene of Larimichthys crocea (L.Crocea). It is friendly for breeding and the marine environment as well. ...
متن کاملGene map of large yellow croaker (Larimichthys crocea) provides insights into teleost genome evolution and conserved regions associated with growth
The genetic map of a species is essential for its whole genome assembly and can be applied to the mapping of important traits. In this study, we performed RNA-seq for a family of large yellow croakers (Larimichthys crocea) and constructed a high-density genetic map. In this map, 24 linkage groups comprised 3,448 polymorphic SNP markers. Approximately 72.4% (2,495) of the markers were located in...
متن کاملTranscriptome Analysis Reveals L-amino Acids as Olfactory Stimulant in the Large Yellow Croaker (Larimichthys crocea)
Fish perceived small molecules with high aqueous solubility by chemoreception. The chemical senses of fish can be divided into olfaction, gustation and less well defined sense which is represented by the general chemical senses and the existing chemosensory cells [1,2]. Fish olfactory sense can detect four main classes of chemicals (odorants) mainly; amino acids, gonadal steroids, bile acids an...
متن کاملMolecular characterization and functional analysis of a piscidin gene in large yellow croaker (Larimichthys crocea)
The piscidin family, which includes potent antimicrobial peptides with broad-spectrum activity, plays an important role in the innate immune system of fish. In this study, we cloned piscidin-5-like type 3 (Lcpis5lt3) in large yellow croaker (Larimichthys crocea). Multiple alignments with other known piscidins revealed amino acid conservation throughout the fish, especially at the signal peptide...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Communications Biology
سال: 2018
ISSN: 2399-3642
DOI: 10.1038/s42003-018-0207-3